The detailed information of tRNA gene sequence


Sequence ID>W1711573396
Genome IDMNDC01000031
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium 13_2_20CM_58_27 [MNDC]
Start position on genome 23413
End posion on genome 23511
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tactgctcgc
tRNA gene sequence 
GGAGGCGCAAAGGGCCCGGTGGTCCTCATGGTCTTCAAAACCATAGCCCGTGTCCTTCGC
GGATTCGGGGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
agtcctttct
Secondary structure (Cloverleaf model)
>W1711573396	SeC(p)	TCA
                   c      GCCA agtcctttct
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    G       G G G A       G T G G G     C
    G       + | | |                 T T
    T       T C C T
      G G          C     AGCCCGTGTCCTTCGCGGATTCGGGG
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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