The detailed information of tRNA gene sequence


Sequence ID>W1711573664
Genome IDMNDP01000400
Search identical group
Phylum/ClassGemmatimonadota
SpeciesGemmatimonadetes bacterium 13_2_20CM_2_69_23 [MNDP]
Start position on genome 13336
End posion on genome 13243
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gggataacgc
tRNA gene sequence 
GGGGGCGGCTCGGGCCTGGTGGTCCGACTGGTCTTCAAAACCAGCTGGGGCTCGTTTGAG
CCTCGGTAGGTTCGATTCCTACACGCTCCCGCCA
Downstream region at tRNA end position 
ccgtgcgcgc
Secondary structure (Cloverleaf model)
>W1711573664	SeC(p)	TCA
                   c      GCCA ccgtgcgcgc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    C     C A T C C     A
      T C C        T      | | | | |     G
    G       G G G C       G T A G G     C
    G       + | | |                 T T
    T       T C C G
      G G          A     CTGGGGCTCGTTTGAGCCTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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