The detailed information of tRNA gene sequence


Sequence ID>W1711574257
Genome IDMNFC01000141
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium 13_1_40CM_4_69_5 [MNFC]
Start position on genome 5214
End posion on genome 5120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcggttcgc
tRNA gene sequence 
GGAGGGGTGGCCGAGCCCGGTTGAAGGCGTCCGACTCGAAATCGGATAGGGGCCCAGAAG
GTCCCTCGGGGGTTCAAATCCTCTCCCCTCCGCCA
Downstream region at tRNA end position 
aattatctga
Secondary structure (Cloverleaf model)
>W1711574257	Ser	CGA
                   c      GCCA aattatctga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
    C C G A        G      + | + | |     A
  C         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAGGGGCCCAGAAGGTCCCTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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