The detailed information of tRNA gene sequence


Sequence ID>W1711574498
Genome IDMNFM01000042
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_40CM_4_68_4 [MNFM]
Start position on genome 2213
End posion on genome 2307
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctgagcacga
tRNA gene sequence 
GAGAGTGCATGAGTCCCGGTGGGCTCCACGGTCTTCAAAACCGTTGACGGGGCGTAGTAC
GTTCCGAGGTGGGTTCGACTCCCATGCACTCTCGCag
Downstream region at tRNA end position 
tgagccgtca
Secondary structure (Cloverleaf model)
>W1711574498	SeC(p)	TCA
                   a      GCag tgagccgtca
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGACGGGGCGTAGTACGTTCCGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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