The detailed information of tRNA gene sequence


Sequence ID>W1711574864
Genome IDMNGQ01000006
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_40CM_3_65_12 [MNGQ]
Start position on genome 1397
End posion on genome 1305
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actccccagt
tRNA gene sequence 
GGAGAGGTGGCCGAGTCCGGTTGAAGGCGACGGTCTCGAAAACCGTTATGGGTCACTGGC
CCATCGAGAGTTCAAATCTCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gccgtttccg
Secondary structure (Cloverleaf model)
>W1711574864	Ser	CGA
                   t      GCCA gccgtttccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C T G A        G      | | | | |     A
  C         G C C G       G A G A G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TATGGGTCACTGGCCCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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