The detailed information of tRNA gene sequence


Sequence ID>W1711574865
Genome IDMNGQ01000014
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_40CM_3_65_12 [MNGQ]
Start position on genome 15800
End posion on genome 15723
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcggccaat
tRNA gene sequence 
AGGGGCGTAGCTCAGCCTGGTCAGAGCATCGGTCTCCAAAACCGAGGGCCGAGGGTTCGA
ATCCTTCCGCCCCTGCCA
Downstream region at tRNA end position 
ctcttccgcc
Secondary structure (Cloverleaf model)
>W1711574865	Trp	CCA
                   t      GCCA ctcttccgcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T T C C     A
    C C G A        A      | | + | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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