The detailed information of tRNA gene sequence


Sequence ID>W1711574889
Genome IDMNGQ01000080
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_40CM_3_65_12 [MNGQ]
Start position on genome 12411
End posion on genome 12511
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcaagagc
tRNA gene sequence 
TGGGGATGTTCGGAGGCTGGTGCCTCCCGCGGTCTTCAAAACCGTTTGCGGGGCGCTGTT
GAGGCGTCCTGGGTGGGTTCGATTCCCATCCATCCCCGCCAa
Downstream region at tRNA end position 
agttcgccgc
Secondary structure (Cloverleaf model)
>W1711574889	SeC(p)	TCA
                   c      CCAa agttcgccgc
                     T + G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          C C
                    G     C C T A C     T
    C G G A        T      | | + |       T
  T         G G C T       G G G T T     A
  G         | +                     C G
  G         C T C C
    T G C          C     TTGCGGGGCGCTGTTGAGGCGTCCTGGGT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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