The detailed information of tRNA gene sequence


Sequence ID>W1711575981
Genome IDMNJY01000066
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium 13_1_20CM_2_62_14 [MNJY]
Start position on genome 14055
End posion on genome 13977
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatccggtat
tRNA gene sequence 
GGGGCCGTCGTTCAGCCTGGTTTAGGACGCCAGATTGTCAATCTGGAGGTCGCGGGTTCA
AATCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttttccccgg
Secondary structure (Cloverleaf model)
>W1711575981	Asp	GTC
                   t      GCCA ttttccccgg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        C      + | | | |     A
  T         C T T G       G C G G G     C
  G         | + | |                 T T
  G         G G A C
    T T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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