The detailed information of tRNA gene sequence


Sequence ID>W1711576018
Genome IDMNKE01000058
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_20CM_2_70_9 [MNKE]
Start position on genome 6718
End posion on genome 6811
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggtcctttcc
tRNA gene sequence 
GAGAGTGCGGGGGCTCCGGTGAGCTCCTCGGTCTTCAAAACCGTTGACGGGGCGCTTGCG
TTCCGTGGTGGGTTCGACTCCCATGCACTCTCGCag
Downstream region at tRNA end position 
cgcgggacgt
Secondary structure (Cloverleaf model)
>W1711576018	SeC(p)	TCA
                   c      GCag cgcgggacgt
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    G     T A C C C     A
      C C T        G      + | | | |     G
    G       C G G G       G T G G G     C
    G       | | + |                 T T
    T       G C T C
      G A          C     TGACGGGGCGCTTGCGTTCCGTG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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