The detailed information of tRNA gene sequence


Sequence ID>W1711581630
Genome IDMNUJ01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Berkelbacteria bacterium CG1_02_42_45 [MNUJ]
Start position on genome 3520
End posion on genome 3594
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
caatctcgac
tRNA gene sequence 
GGGCCAGTAGTTCATCGGTAGAATGCCTCATTCGCATTGAGGAGGTAGAGGGTTCAATTC
CCTCCTGGTCCACCA
Downstream region at tRNA end position 
aggaattata
Secondary structure (Cloverleaf model)
>W1711581630	Ala	CGC
                   c      ACCA aggaattata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
        T A        A      | | | | |     A
      C     C T T G       G A G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        G     AGGTA
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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