The detailed information of tRNA gene sequence


Sequence ID>W1711581845
Genome IDMNUQ01000047
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrionaceae bacterium CG1_02_65_16 [MNUQ]
Start position on genome 5397
End posion on genome 5306
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgtcctcgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCACGGTTTAAGGAGCACGCCTGGAAAGTGTGTGTGCCCGAAAGGG
TACCGGAGGTTCGAATCCTCTCCTCTCTGCCA
Downstream region at tRNA end position 
tttttcaccc
Secondary structure (Cloverleaf model)
>W1711581845	Ser	GGA
                   c      GCCA tttttcaccc
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
    A C G A        G      + | | | |     G
  C         G C C T       G G A G G     C
  G           | | |                 T T
  G         A G G A
    T T T A        G     TGTGCCCGAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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