The detailed information of tRNA gene sequence


Sequence ID>W1711584763
Genome IDMNYW01000152
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium CG2_30_70_394 [MNYW]
Start position on genome 24913
End posion on genome 25010
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgctcggcgc
tRNA gene sequence 
GGGAGTGGATGTGGCCTGGTGGCCGCCGCGGTCTTCAAAACCGTTGAGGGGCCGCGCGAG
CGGTCCTTGGTGGGTTCGATCCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
gcccaccccg
Secondary structure (Cloverleaf model)
>W1711584763	SeC(p)	TCA
                   c      GCCA gcccaccccg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          C T
                    A     T A C C C     A
      T C C        T      + | | | |     G
    G       G G T G       G T G G G     C
    G       | | + |                 T T
    T       C C G C
      G G          C     TGAGGGGCCGCGCGAGCGGTCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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