The detailed information of tRNA gene sequence


Sequence ID>W1711585428
Genome IDMNZR01000246
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacteraceae bacterium CG2_30_61_12 [MNZR]
Start position on genome 6578
End posion on genome 6480
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tagggtagcc
tRNA gene sequence 
GGAAGTGCCAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGAGGCAGTGAAG
GCTGTCTCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gatctgccca
Secondary structure (Cloverleaf model)
>W1711585428	SeC(p)	TCA
                   c      GCCA gatctgccca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGAGGCAGTGAAGGCTGTCTCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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