The detailed information of tRNA gene sequence


Sequence ID>W1711621340
Genome IDMPDA01000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseobacter sp. MedPE-SWde [MPDA]
Start position on genome 84305
End posion on genome 84379
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacagcaagt
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACGTCAGGTTTTCAACCTGAAAAGAGGGGTTCGACTC
CCCTACGGGCTGCCA
Downstream region at tRNA end position 
ctgtgccttt
Secondary structure (Cloverleaf model)
>W1711621340	Glu	TTC
                   t      GCCA ctgtgccttt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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