The detailed information of tRNA gene sequence


Sequence ID>W1711621351
Genome IDMPDA01000011
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseobacter sp. MedPE-SWde [MPDA]
Start position on genome 12343
End posion on genome 12257
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cacgacacct
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGCTAGTATTGGCAACGATGTG
GAGGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
cttattcccc
Secondary structure (Cloverleaf model)
>W1711621351	Leu	CAG
                   t      ACCA cttattcccc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATTGGCAACGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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