The detailed information of tRNA gene sequence


Sequence ID>W1711621354
Genome IDMPDA01000014
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseobacter sp. MedPE-SWde [MPDA]
Start position on genome 29091
End posion on genome 29014
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agacatgtgc
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGATTAGAGCAGGGAACTTCTAATTCTCAGGTCGGGGGTTCGA
GTCCTCCACGGCTCGCCA
Downstream region at tRNA end position 
tatgttttca
Secondary structure (Cloverleaf model)
>W1711621354	Arg	TCT
                   c      GCCA tatgttttca
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C C T C C     A
    T C G A        A      | | + | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  A         G A G C
    T T A          A     AGGTC
                    G - C
                    G + T
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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