The detailed information of tRNA gene sequence


Sequence ID>W1711621357
Genome IDMPDA01000017
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseobacter sp. MedPE-SWde [MPDA]
Start position on genome 41484
End posion on genome 41559
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccggcattgc
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCTCGGGTTCGAAC
CCTGATGCCCCTGCCA
Downstream region at tRNA end position 
gtaaaatcaa
Secondary structure (Cloverleaf model)
>W1711621357	Trp	CCA
                   c      GCCA gtaaaatcaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C A
                    T     A G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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