The detailed information of tRNA gene sequence


Sequence ID>W1711622120
Genome IDMPDV01000314
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile [MPDV]
Start position on genome 410
End posion on genome 322
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTTCGAAAGGGGC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatgcccaga
Secondary structure (Cloverleaf model)
>W1711622120	Ser	TGA
                   t      GCCA aatgcccaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTTCGAAAGGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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