The detailed information of tRNA gene sequence


Sequence ID>W1711625280
Genome IDMPIN01000009
Search identical group
Phylum/ClassMyxococcota
SpeciesCystobacter ferrugineus [MPIN]
Start position on genome 496870
End posion on genome 496965
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatcgcgcgc
tRNA gene sequence 
GGTAGGACCACTGGACCTGGTGGCTGGCCCGGTCTTCAAAACCGGTGGGGGGCATGGAGA
CATGTCCCCGGGAGGTTCGATTCCTCTGTCCTACCGacc
Downstream region at tRNA end position 
tttttcccct
Secondary structure (Cloverleaf model)
>W1711625280	SeC(p)	TCA
                   c      Gacc tttttcccct
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T T
                    C     T C T C C     A
      C C A        A      + | | | |     G
    T       G G T C       G G A G G     C
    G       | + + |                 T T
    G       C T G G
      T G G        C     TGGGGGGCATGGAGACATGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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