The detailed information of tRNA gene sequence


Sequence ID>W1711629492
Genome IDMPOZ01000357
Search identical group
Phylum/ClassCoprothermobacterota
SpeciesCoprothermobacter sp. EBM-25 [MPOZ]
Start position on genome 8334
End posion on genome 8428
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taatgagtgt
tRNA gene sequence 
GGGAGCAGAAGGGTGCTGGTGTGCCTGCCGGACTTCAAATCCGGTTCCTCGTCCAAAAGA
CGAGGGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
aaaacttaat
Secondary structure (Cloverleaf model)
>W1711629492	SeC(p)	TCA
                   t      GCCA aaaacttaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        A      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G T          G     TTCCTCGTCCAAAAGACGAGGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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