The detailed information of tRNA gene sequence


Sequence ID>W1711629494
Genome IDMPPB01000009
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaeta sp. EBM-43 [MPPB]
Start position on genome 58583
End posion on genome 58509
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
actcaacagc
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCCACGTTGACATCGTGGAAGTCGCCAGTTCAATCC
TGGCATCGCCCATCA
Downstream region at tRNA end position 
gcaagcagcc
Secondary structure (Cloverleaf model)
>W1711629494	Val	GAC
                   c      ATCA gcaagcagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          C T
                    T     C G G T C     A
        G A        A      | | | | |     A
      C     C T C A       G C C A G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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