The detailed information of tRNA gene sequence


Sequence ID>W131174221
Genome IDARII01000009
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio sp. ALE9 [ARII]
Start position on genome 28242
End posion on genome 28318
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgtctcgga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
attgtcagag
Secondary structure (Cloverleaf model)
>W131174221	Met	CAT
                   a      ACCA attgtcagag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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