The detailed information of tRNA gene sequence


Sequence ID>W1711666540
Genome IDMRCB01000006
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHydrococcus rivularis NIES-593 [MRCB]
Start position on genome 167265
End posion on genome 167179
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccaataatT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGGCGCACTCGAAATGCGTTTTAGGGAAACCTAAC
GGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
tttaaacaat
Secondary structure (Cloverleaf model)
>W1711666540	Ser	CGA
                   T      GTtt tttaaacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TTTAGGGAAACCTAAC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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