The detailed information of tRNA gene sequence


Sequence ID>W1711666607
Genome IDMRCD01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix sp. HK-06 [MRCD]
Start position on genome 20528
End posion on genome 20600
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
gtttagtcaa
tRNA gene sequence 
CCAGGGTTGGCCGATCGGTTTAGGCAACGAACTCATAATTCGTCCCAGACAGGTTCAACT
CCTGTACCCTGGAttt
Downstream region at tRNA end position 
ttataacaga
Secondary structure (Cloverleaf model)
>W1711666607	Pseudo	CAT
                   a      Attt ttataacaga
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     T G T C C     A
      C T A        G      | | | | |     A
    G       G C C G       A C A G G     C
    G         | | |                 T T
    T       A G G C
      T T          A     CCCAG
                    A - T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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