The detailed information of tRNA gene sequence


Sequence ID>W1711666657
Genome IDMRCE01000003
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPhormidium ambiguum IAM M-71 [MRCE]
Start position on genome 181178
End posion on genome 181254
Amino Acid Pseudo
Anticodon TAA
Upstream region at tRNA start position 
cgaaaaagcG
tRNA gene sequence 
TACATACTAGCCGAATTGGTACAGGCGCTTGATTTAAGCTCAAGATATACAGGTTCAAAT
CCTGTGTGTGAACACA
Downstream region at tRNA end position 
accgcttttt
Secondary structure (Cloverleaf model)
>W1711666657	Pseudo	TAA
                   G      CACA accgcttttt
                     T - A
                     A   A
                     C - G
                     A - T
                     T + G
                     A - T
                     C - G          T A
                    T     T G T C C     A
      T A A        A      | | | | |     A
    T       G C C G       A C A G G     C
    G         | | |                 T T
    G       A G G C
      T A C        G     ATAT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       C
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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