The detailed information of tRNA gene sequence


Sequence ID>W1711666661
Genome IDMRCE01000003
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPhormidium ambiguum IAM M-71 [MRCE]
Start position on genome 144657
End posion on genome 144584
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
actaccaaat
tRNA gene sequence 
GACTGAGTATCCAAGCGGTCGAAGGGGAGAGTCTGCAAAACTCTTAAGCGTGAGTTCAAA
TCTCACCTCAGTCTttg
Downstream region at tRNA end position 
gacatcgcag
Secondary structure (Cloverleaf model)
>W1711666661	Pseudo	GCA
                   t      Tttg gacatcgcag
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      C G A        A      | | | | |     A
    G       A C C T       G T G A G     C
    G         | | +                 T T
    T       A G G G
      C G A        G     TAAGC
                    A - T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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