The detailed information of tRNA gene sequence


Sequence ID>W1711707062
Genome IDMSRP01000004
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomyces naeslundii [MSRP]
Start position on genome 62547
End posion on genome 62459
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
tcatgggcga
tRNA gene sequence 
GGTAGCGTGTCCGAGCGGCCGAAGGTGCAGATCTCGAAAGTCTGTGTGGTTCATAGCCAC
CCTGGGTTCGAATCCCAGCGCTACCGCCA
Downstream region at tRNA end position 
cgggaatccc
Secondary structure (Cloverleaf model)
>W1711707062	Pseudo	CGA
                   a      GCCA cgggaatccc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       C T G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTGGTTCATAGCCACC
                    C - G
                    A - T
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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