The detailed information of tRNA gene sequence


Sequence ID>W1711721721
Genome IDMTJN01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesRhodoferax fermentans [MTJN]
Start position on genome 4146541
End posion on genome 4146465
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggttcggtt
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACAGTTCAAG
TCTGTGACGCCCTACCA
Downstream region at tRNA end position 
attaaattat
Secondary structure (Cloverleaf model)
>W1711721721	Met	CAT
                   t      ACCA attaaattat
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     G T G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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