The detailed information of tRNA gene sequence


Sequence ID>W1711723480
Genome IDMTPJ01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis [MTPJ]
Start position on genome 376
End posion on genome 284
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ataaatactt
tRNA gene sequence 
GGAAGCGTATTGCCACCGGTGTGGTACTTGGTCTTCAAAACCAATGGCGGGCAGCTTGTC
CGTGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
attaaacaaa
Secondary structure (Cloverleaf model)
>W1711723480	SeC(p)	TCA
                   t      GCCA attaaacaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C C G T       G T A G G     C
    G       | | + |                 T T
    T       G G T A
      G T          C     TGGCGGGCAGCTTGTCCGTG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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