The detailed information of tRNA gene sequence


Sequence ID>W1711765873
Genome IDMUXX01000004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHaemophilus paraphrohaemolyticus [MUXX]
Start position on genome 70031
End posion on genome 69937
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttttaaaac
tRNA gene sequence 
GGAAGGTCGTCATCTCCGGTGAGGTGGCAGGACTTCAAATCCTGTTGAGGACGCCAGCGT
TCTCGGGTGGGTTCGACTCCCATGACCTTCCGCCA
Downstream region at tRNA end position 
acttcatttc
Secondary structure (Cloverleaf model)
>W1711765873	SeC(p)	TCA
                   c      GCCA acttcatttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G          T C
                    G     T A C C C     A
      C C T        T      + | | | |     G
    G       C T A C       G T G G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGAGGACGCCAGCGTTCTCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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