The detailed information of tRNA gene sequence


Sequence ID>W1712036214
Genome IDNFHJ01000001
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesAkkermansia muciniphila [NFHJ]
Start position on genome 591172
End posion on genome 591247
Amino Acid Pseudo
Anticodon CTC
Upstream region at tRNA start position 
cggctgtcat
tRNA gene sequence 
GTTCCCTTCTTCTAGCGGTCAGGAAGGCCGTCTCTCCAACGGCAAAGGCTCGGTTCAACT
CCGGCAGGGAATGCCA
Downstream region at tRNA end position 
tccggcagcc
Secondary structure (Cloverleaf model)
>W1712036214	Pseudo	CTC
                   t      GCCA tccggcagcc
                     G + T
                     T - A
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     C G G C C     A
      C G A        C        + | | |     A
    G       T C T T       C T C G G     C
    G       + | | |                 T T
    T       G G A A
      C A          G     AAAGG
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       C
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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