The detailed information of tRNA gene sequence


Sequence ID>W1712039373
Genome IDNFJQ01000008
Search identical group
Phylum/ClassSynergistota
SpeciesCloacibacillus sp. An23 [NFJQ]
Start position on genome 180129
End posion on genome 180225
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtcgccgcgc
tRNA gene sequence 
GGAGGTGCGTTTCAGCTGGTGCTGGGCCCGGACTTCAAATCCGGTGAGAGTGGTTAGAAG
CTGCTCTGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
agtcatacca
Secondary structure (Cloverleaf model)
>W1712039373	SeC(p)	TCA
                   c      GCCA agtcatacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     C   A          T T
                    G     C A T C C     A
      T C G        T      | | | | |     G
    G       A C T T       G T A G G     C
    G       | | + +                 T T
    T       T G G G
      G C          C     TGAGAGTGGTTAGAAGCTGCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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