The detailed information of tRNA gene sequence


Sequence ID>W1712080680
Genome IDNHMK01000030
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus indicus [NHMK]
Start position on genome 139971
End posion on genome 139896
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggcgcctga
tRNA gene sequence 
GGGCTCTTAGCTCAACGGTCAGAGCAGTCGGCTCATAACCGATTGGTTGCCGGTTCAAAT
CCGGCAGGGCCCACCA
Downstream region at tRNA end position 
gaaacgggcg
Secondary structure (Cloverleaf model)
>W1712080680	Met	CAT
                   a      ACCA gaaacgggcg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C G G C C     A
      C A A        A      | | | | |     A
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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