The detailed information of tRNA gene sequence


Sequence ID>W1712080681
Genome IDNHMK01000030
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus indicus [NHMK]
Start position on genome 139890
End posion on genome 139816
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caccagaaac
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCATTCGCTTCACACGCGAAGGGTCGTAGGTTCAAATC
CTATACCGCCCACCA
Downstream region at tRNA end position 
gaacagaaaa
Secondary structure (Cloverleaf model)
>W1712080681	Val	CAC
                   c      ACCA gaacagaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T A T C C     A
        G A        A      + | | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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