The detailed information of tRNA gene sequence


Sequence ID>W1712097523
Genome IDNIDE01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesFimbriiglobus ruber [NIDE]
Start position on genome 977161
End posion on genome 977232
Amino Acid Pseudo
Anticodon CCC
Upstream region at tRNA start position 
tcgtgaacgt
tRNA gene sequence 
GCGGGATTGGTATATCGGCTGTGCCCAGCCTTCCCAAGGCTGTGAGACGAGTTCGACTCT
CGTATCCCGCTCtc
Downstream region at tRNA end position 
ttaaagcctt
Secondary structure (Cloverleaf model)
>W1712097523	Pseudo	CCC
                   t      TCtc ttaaagcctt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    T     T G C T C     A
        T A        G      | | | | |     G
      C     T A T G       A C G A G     C
      G     + | + |                 T T
      G     G T G C
        C T        C     TGAG
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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