The detailed information of tRNA gene sequence


Sequence ID>W1712097530
Genome IDNIDE01000002
Search identical group
Phylum/ClassPlanctomycetota
SpeciesFimbriiglobus ruber [NIDE]
Start position on genome 509324
End posion on genome 509237
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgcagcgcc
tRNA gene sequence 
GGAGCGGTGCTCGAGTGGTTGAAGAGGCAGCACTGGAAATGCTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCCCGCTCCGCtt
Downstream region at tRNA end position 
atccgatgcc
Secondary structure (Cloverleaf model)
>W1712097530	Ser	GGA
                   c      GCtt atccgatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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