The detailed information of tRNA gene sequence


Sequence ID>W1712097565
Genome IDNIDE01000014
Search identical group
Phylum/ClassPlanctomycetota
SpeciesFimbriiglobus ruber [NIDE]
Start position on genome 1357646
End posion on genome 1357732
Amino Acid Pseudo
Anticodon GGA
Upstream region at tRNA start position 
tcgacgaacG
tRNA gene sequence 
GAAGGGCGAGCCAACCGGTGATGGCACCCGATTGGAAGTCGGGCGAGCGATGAGCCTTGA
GGGTTCGACTCCCTCTCCTTCCGCTA
Downstream region at tRNA end position 
cagtgtctcc
Secondary structure (Cloverleaf model)
>W1712097565	Pseudo	GGA
                   G      GCTA cagtgtctcc
                     G - C
                     A   C
                     A - T
                     G + T
                     G - C
                     G - C
                     C   T          T C
                    G     C T C C C     A
      C C A        A      | | | | |     G
    G       A C C G       G A G G G     C
    G       | | | |                 T T
    T       T G G C
      G A          A     CGAGCGATGAGCCTT
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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