The detailed information of tRNA gene sequence


Sequence ID>W1712102729
Genome IDNINW01000012
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPigmentiphaga sp. NML080357 [NINW]
Start position on genome 2266
End posion on genome 2339
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taacccccat
tRNA gene sequence 
GGCGCGTTAGCAAAGCGGTTATGCACCGGATTGCAAATCCGTGTAGGTCGGTTCGACTCC
GGCACGCGCCTCCA
Downstream region at tRNA end position 
gtattcgccc
Secondary structure (Cloverleaf model)
>W1712102729	Cys	GCA
                   t      TCCA gtattcgccc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     C G G C C     A
        G A        A      | + | | |     G
      C     A A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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