The detailed information of tRNA gene sequence


Sequence ID>W1712104658
Genome IDNIPX01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHaematobacter missouriensis [NIPX]
Start position on genome 563
End posion on genome 636
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccacggctcc
tRNA gene sequence 
GGCGGGTTGGCGGAGAGGTTACGCAGCGGATTGCAAATCCGTGAAGACCGGTTCGATTCC
GGTACCCGCCTCCA
Downstream region at tRNA end position 
gaaatttcca
Secondary structure (Cloverleaf model)
>W1712104658	Cys	GCA
                   c      TCCA gaaatttcca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      A     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GAAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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