The detailed information of tRNA gene sequence


Sequence ID>W1712105789
Genome IDNISJ01000011
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis witflariensis [NISJ]
Start position on genome 220
End posion on genome 136
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atctcccaac
tRNA gene sequence 
GCGGGCGTGGTGGAATTGGTAGACGCGCGGGATTCAAAATCCCGTTCCGCAAGGAGTGTG
GGTTCGATTCCCACCGCCCGCACCA
Downstream region at tRNA end position 
tccaagattg
Secondary structure (Cloverleaf model)
>W1712105789	Leu	CAA
                   c      ACCA tccaagattg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGCAAGGAGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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