The detailed information of tRNA gene sequence


Sequence ID>W1712110511
Genome IDNJIG01000023
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesAchromobacter marplatensis [NJIG]
Start position on genome 55062
End posion on genome 54967
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggctgctga
tRNA gene sequence 
GGAAGGCATTCGTGCCCGGCGGCACGGCTGGGCTTCAAACCCAGTTGGGGGCGTCAGACG
TTCCCAGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
ccctcttcaa
Secondary structure (Cloverleaf model)
>W1712110511	SeC	TCA
                   a      GCCA ccctcttcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C C        T      | + | | |     G
    G       G T G C       G T A G G     C
    G       | | | |                 T T
    C       C A C G
      G G          G     TTGGGGGCGTCAGACGTTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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