The detailed information of tRNA gene sequence


Sequence ID>PL171000024
Genome IDAP003604
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. PCC 7120 plasmid:pCC7120delta
Start position on genome 50154
End posion on genome 50080
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctgctgtct
tRNA gene sequence 
GGGGTCATAGCTCAACTGGCTAGAGCGTCCGCCTTGCAAGCGGGAGGTTAGGGGTTCAAA
TCCCCTTGATTCCACtt
Downstream region at tRNA end position 
ttggtgtctg
Secondary structure (Cloverleaf model)
>PL171000024	Ala	TGC
                   t      ACtt ttggtgtctg
                     G - C
                     G - C
                     G + T
                     G + T
                     T - A
                     C - G
                     A - T          T A
                    T     T C C C C     A
      C A A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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