The detailed information of tRNA gene sequence


Sequence ID>PL171000076
Genome IDAP014705
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylobacterium aquaticum MA-22A plasmid:pMaq22A_1p
Start position on genome 136996
End posion on genome 136921
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccgccggcaa
tRNA gene sequence 
GCTCCCATCGTCTAGCGGTCCAGGACGTCGCCCTCTCACGGCGAAAACAGGGGTTCGAGT
CCCCTTGGGAGCGCCA
Downstream region at tRNA end position 
cgggtttcct
Secondary structure (Cloverleaf model)
>PL171000076	Glu	CTC
                   a      GCCA cgggtttcct
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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