The detailed information of tRNA gene sequence


Sequence ID>PL171000096
Genome IDAP018191
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. NIES-2111 plasmid:plasmid7
Start position on genome 21499
End posion on genome 21572
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gctaccaaaT
tRNA gene sequence 
GCAGGGATGGTGTAATTGGCAACACCACCGTCTCCAAAACTGTTGTTCTGGGTTCAAGTC
CTAGTCTCTGCGTtg
Downstream region at tRNA end position 
ccgtgtccta
Secondary structure (Cloverleaf model)
>PL171000096	Trp	CCA
                   T      GTtg ccgtgtccta
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T G
                    T     G A T C C     A
      T A A        G      | | + | |     A
    T       T G T G       C T G G G     C
    G       | | | |                 T T
    G       A C A C
      C A          C     TGTT
                    A - T
                    C - G
                    C   T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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