The detailed information of tRNA gene sequence


Sequence ID>PL171000116
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 172124
End posion on genome 172050
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gactccacat
tRNA gene sequence 
TGCAGCGTCACCTAACGGCAAGGTACTCGGCTCATAACCGAGAGTATACGGGTTCAAATC
CCGTCGCTGCGACCA
Downstream region at tRNA end position 
aatgcacaga
Secondary structure (Cloverleaf model)
>PL171000116	Met	CAT
                   t      ACCA aatgcacaga
                     T + G
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
        A A        C      | | | | |     A
      C     T C C A       A C G G G     C
      G     | | | |                 T T
      G     A G G T
        C A        A     AGTAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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