The detailed information of tRNA gene sequence


Sequence ID>PL171000119
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 171657
End posion on genome 171565
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacccattac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTAAAAGCATCCTCCTGCTAAGAGGAAGCGGGTAGTTAATGC
CCGTCGCAGGTTCAAATCCTGTCCTCTCCGCCT
Downstream region at tRNA end position 
tatgagaacg
Secondary structure (Cloverleaf model)
>PL171000119	Ser	GCT
                   c      GCCT tatgagaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      T A A        A     AGCGGGTAGTTAATGCCCGTC
                    T - A
                    C - G
                    C - G
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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