The detailed information of tRNA gene sequence


Sequence ID>PL171000127
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 170473
End posion on genome 170398
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcgctttcgt
tRNA gene sequence 
AGCCCTGTAACTCAGTTGGGAGAGTGCCTCTCTTACAAAGAGGAAGTCGCGGGTTCAATT
CCTGCCGGGGCTACCA
Downstream region at tRNA end position 
acttatggga
Secondary structure (Cloverleaf model)
>PL171000127	Val	TAC
                   t      ACCA acttatggga
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C A       G C G G G     C
    G       | | | |                 T T
    G       G A G T
      G A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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