The detailed information of tRNA gene sequence


Sequence ID>PL171000128
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 170391
End posion on genome 170315
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
accaacttat
tRNA gene sequence 
GGGAGTGTAGCTCAATGGAATAGAACATCGAGCTTCTACCTCGAAGGTTGTGGGTTCAAG
TCCTACCACTCTCGCCT
Downstream region at tRNA end position 
atgggtctgt
Secondary structure (Cloverleaf model)
>PL171000128	Arg	TCT
                   t      GCCT atgggtctgt
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | + | |     A
    G       C T C G       G T G G G     C
    G       | |   |                 T T
    A       G A A C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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