The detailed information of tRNA gene sequence


Sequence ID>PL171000129
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 170312
End posion on genome 170236
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctcgcctat
tRNA gene sequence 
GGGTCTGTAGCTTAATCGGTAAAGCATCTAACTGGCCGTTAGAAGGTTGTCGGTTCGATT
CCGACCAGTATCCACC
Downstream region at tRNA end position 
Aaatatgggg
Secondary structure (Cloverleaf model)
>PL171000129	Ala	GGC
                   t      CACC Aaatatgggg
                     G - C
                     G + T
                     G   A
                     T   T
                     C - G
                     T - A
                     G - C          T T
                    T     C A G C C     A
      T A A        A      | | | | |     G
    C       T T C G       G T C G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    A - T
                    A - T
                  C       G
                  T       C
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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