The detailed information of tRNA gene sequence


Sequence ID>PL171000130
Genome IDAP018211
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix brevissima NIES-22 plasmid:plasmid4
Start position on genome 170230
End posion on genome 170155
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccaaatat
tRNA gene sequence 
GGGGTCATAGCTCTAACTGGCTAGAGCGCCTGCCTTGCACACAGGAGGTTAGGGGTTCAA
ATCCCCTTGATTCCACtg
Downstream region at tRNA end position 
atggtgtctg
Secondary structure (Cloverleaf model)
>PL171000130	Ala	TGC
                   t      ACtg atggtgtctg
                     G - C
                     G - C
                     G + T
                     G + T
                     T - A
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C A A T        A      | | | | |     A
  T         C T C G       A G G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C   A
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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